Influenza Weekly Surveillance Bulletin

Week 16: 15 April 2024 - 21 April 2024

This weekly report outlines the current epidemiology of influenza and respiratory syncytial virus (RSV) in Northern Ireland (NI), along with information about the number of respiratory outbreaks and excess deaths. It offers references to additional sources of information for further details.

  • From week 45, 2023, a new Laboratory Information System (LIMS) was implemented and validation is ongoing. Therefore, results should be interpreted with caution.

1 Summary

In week 16, influenza activity remains stable across surveillance indicators.

  • The GP influenza/flu-like-illness (flu/FLI) consultation rate was 3.9 per 100,000 population.

  • There were 25 unique episodes of influenza identified. For RSV, there was one unique episode identified.

  • One sentinel sample was positive for influenza from four samples submitted for testing (25.0% positivity). For RSV, no samples were positive from four samples submitted for testing.

  • 27 non-sentinel samples were positive for influenza from 1,176 samples submitted for testing (2.3% positivity). For RSV, one sample was positive from 677 samples submitted (0.2% positivity).

  • There were no confirmed respiratory outbreaks reported to the PHA Health Protection acute response duty room.

  • 16 community-acquired emergency influenza hospital admissions were recorded. For RSV, there was one admission.

  • The average number of daily cases of community-acquired emergency influenza A inpatients has decreased. For flu B, the average number of daily cases remained relatively stable and at low levels.

  • 91 respiratory associated deaths out of 379 all-cause deaths were reported (24.0%).

2 Incidence and Prevalence of Influenza and Respiratory Syncytial Virus (RSV)

2.1 Consultation rates for influenza/influenza-like-illness (‘flu/FLI’)

The GP flu/FLI consultation rate during week 16 was 3.9 per 100,000 population. This is a decrease from week 15 (5.1 per 100,000 population). Activity remains at baseline levels (≤10.7 per 100,000 population) (Figure 2.1).

The 0-4 and 15-64 year old age groups observed a decrease in consultation rates when compared to week 15, while the 5-14 and 65+ age groups remained stable. The highest rate in week 16 was seen in the 15-64 age group (4.6 per 100,000 population).

Since the beginning of the COVID-19 pandemic, the offer and uptake of GP consultations has changed. As a result, consultation rates in the most recent period are unlikely to be directly comparable to pre-pandemic and pandemic years.

A supplementary table of Flu/FLI consultation rates by age group are shown at the end of this bulletin.

Northern Ireland GP consultation rates for ‘flu/FLI’ 2020/21 – 2023/24

Figure 2.1: Northern Ireland GP consultation rates for ‘flu/FLI’ 2020/21 – 2023/24

The baseline MEM threshold for Northern Ireland is 10.7 per 100,000 population for 2023-24. Low activity is 10.7 to <21.1, moderate activity 21.1 to <47.7, high activity 47.7 to <68.3 and very high activity is >68.3 per 100,000 population.

2.2 Episodes of influenza

All virology data provided here are preliminary. Virology data for current and prior weeks, as included in this or future bulletins, are subject to updates based on laboratory returns received after the last report was produced. The current bulletin offers the most current information available.

The number of new influenza episodes decreased slightly in week 16, with 25 unique episodes identified. There were 30 episodes reported in week 15 (Figure 2.2). Of the 25 episodes identified, one were typed as Flu A(H1), five were Flu A(H3), seven were Flu A(not subtyped) and 12 were Flu B.

The 0-4 age group observed an increase in episode rates when compared to week 15 while the 65+ age group saw a decrease. The rates in the 5-14 and 15-64 age groups remained stable. The highest episode rates in week 16 was in the 0-4 age group (5.3, per 100,000 population) (Figure 2.3).

Supplementary tables of unique episodes and weekly episode rates by age group are shown at the end of this bulletin.

Weekly number of unique episodes of influenza, by epidemiological week

Figure 2.2: Weekly number of unique episodes of influenza, by epidemiological week


Weekly episode rates of influenza per 100,000 population, by age group, by epidemiological week

Figure 2.3: Weekly episode rates of influenza per 100,000 population, by age group, by epidemiological week

2.3 Episodes of respiratory syncytial virus

The number of new RSV episodes remained stable in week 16, with one unique episode identified. There was one episode reported in week 15 (Figure 2.4).

Supplementary tables of unique episodes and weekly episode rates by age group are shown at the end of this bulletin.

Weekly number of unique episodes of respiratory syncytial virus, by epidemiological week

Figure 2.4: Weekly number of unique episodes of respiratory syncytial virus, by epidemiological week


Weekly episode rates of respiratory syncytial virus per 100,000 population, by age group, by epidemiological week

Figure 2.5: Weekly episode rates of respiratory syncytial virus per 100,000 population, by age group, by epidemiological week

2.4 Virology

2.4.1 Sentinel

In week 16, one sample was positive for influenza from four samples submitted for testing to the Regional Virus Laboratory (RVL) (25.0% positivity) (Table 1). The positive sample was typed as Flu A(H3) (Table 2).

In week 16, no samples were positive for RSV from four samples submitted for testing to RVL (Table 1).

Total sentinel cases of influenza and RSV by age group for 2023/24 are shown in Table 3.

Table 1. Total sentinel tests and positivity for Influenza and Respiratory Syncytial Virus, current week

Total Tests

Total Positives

Positivity (%)

2024 - 16

Influenza

4

1

25

2024 - 16

RSV

4

0

0


Table 2. Sentinel Influenza cases, by subtype, current week

Positive Tests

Flu A (H1)

0

Flu A (H3)

1

Flu A (not subtyped)

0

Flu B

0


Table 3. Total sentinel cases of Influenza and RSV by age group, Week 40 - current week, 2023/24

0-4

5-14

15-64

65+

Total

Flu A (H1)

0

1

3

0

4

Flu A (H3)

0

4

9

9

22

Flu A (not subtyped)

0

0

0

0

0

Flu B

0

0

0

0

0

RSV

6

0

1

0

7

2.4.2 Non-sentinel

In week 16, 27 samples were positive for influenza from 1,176 samples submitted for testing in laboratories across Northern Ireland (2.3% positivity) (Table 4). Of the 27 samples positive, four were typed as Flu A(H1), four were Flu A(H3), seven were Flu A(not subtyped) and 12 were Flu B (Table 5).

In week 16, one sample was positive for RSV from 677 samples submitted for testing in laboratories across Northern Ireland (0.2% positivity) (Table 4).

Total non-sentinel cases of influenza and RSV by age group for 2023/24 are shown in Table 6.

Supplementary tables of total sentinel and non-sentinel tests and positivity for influenza and RSV by epidemiological week are shown at the end of this bulletin.

Table 4. Total non-sentinel tests and positivity for Influenza and Respiratory Syncytial Virus, current week

Total Tests

Total Positives

Positivity (%)

2024 - 16

Influenza

1,176

27

2.30

2024 - 16

RSV

677

1

0.15


Table 5. Non-sentinel Influenza cases, by subtype, current week

Positive Tests

Flu A (H1)

4

Flu A (H3)

4

Flu A (not subtyped)

7

Flu B

12


Table 6. Total non-sentinel cases of Influenza and RSV by age group, Week 40 - current week, 2023/24

0-4

5-14

15-64

65+

Total

Flu A (H1)

46

20

118

158

342

Flu A (H3)

169

79

348

524

1,120

Flu A (not subtyped)

446

277

982

712

2,417

Flu B

34

15

71

4

124

RSV

984

38

122

288

1,432

3 Influenza and Respiratory Syncytial Virus Outbreaks

There were no respiratory outbreaks reported to the PHA Health Protection acute response duty room during week 16 (Figure 3.1).

A supplementary table of outbreaks by subtype and setting from week 40, 2023 is shown at the end of this bulletin.

Weekly number of confirmed influenza and respiratory syncytial virus outbreaks, by year and epidemiological week

Figure 3.1: Weekly number of confirmed influenza and respiratory syncytial virus outbreaks, by year and epidemiological week

4 Hospitalisations and Deaths

4.1 Inpatients and occupancy

There were 16 community-acquired emergency influenza hospital admissions during week 16 (Figure 4.1). The 15-64 age group represented 56.3% of the community-acquired emergency influenza hospital admissions.

The 7-day rolling average of daily cases of community-acquired emergency influenza A inpatients continued to decrease during week 16. For influenza B, the average number of daily cases remained relatively stable and at low levels (Figure 4.2).

Weekly number of community-acquired emergency influenza hospital admissions, by year and epidemiological week

Figure 4.1: Weekly number of community-acquired emergency influenza hospital admissions, by year and epidemiological week


7-day rolling average of community-acquired emergency influenza inpatients

Figure 4.2: 7-day rolling average of community-acquired emergency influenza inpatients

There was one community-acquired emergency RSV hospital admissions during week 16 (Figure 4.3), (Figure 4.4).

Weekly number of community-acquired emergency respiratory syncytial virus hospital admissions, by epidemiological week

Figure 4.3: Weekly number of community-acquired emergency respiratory syncytial virus hospital admissions, by epidemiological week


7-day rolling average of community-acquired emergency respiratory syncytial virus inpatients

Figure 4.4: 7-day rolling average of community-acquired emergency respiratory syncytial virus inpatients

4.2 Medical certificate of cause of death for respiratory-associated deaths

The Northern Ireland Statistics and Research Agency (NISRA) provides the weekly number of respiratory-associated deaths and the proportion of all-cause registered deaths (by week of death registration, not by week of death).

Respiratory-associated deaths include those that are attributable to influenza, other respiratory infections or their complications. This includes “bronchiolitis, bronchitis, influenza or pneumonia” keywords recorded on the death certificate.

In week 16, 91 respiratory associated deaths out of 379 all-cause deaths were reported (24.0%). This is slightly higher to the same period in 2022/23 (80 respiratory deaths out of 345 all-cause deaths, 23.2% (Figure 4.5) and (Figure 4.6).

Weekly number of deaths with respiratory keywords, to current registration week

Figure 4.5: Weekly number of deaths with respiratory keywords, to current registration week


Percentage of deaths with respiratory keywords (%), to current registration week

Figure 4.6: Percentage of deaths with respiratory keywords (%), to current registration week

Figures may be impacted by General Registration Office closures over public holidays.

4.3 All-cause excess deaths (EuroMOMO)

In 2023/24, based on NISRA death registrations and the EuroMOMO model, excess deaths were reported in week 44, 2023 and in weeks 04, 05 and 06, 2024, particularly in those aged 65+. Despite delay correction, reported mortality data are still provisional due to the time delay in registration and observations which can vary from week to week; not all registrations for the current week will have been included this bulletin (Figure 4.7).

Weekly observed and expected number of all-cause deaths, in all ages, to current registration week

Figure 4.7: Weekly observed and expected number of all-cause deaths, in all ages, to current registration week

5 Methods

5.1 Surveillance systems used to monitor influenza activity in Northern Ireland include:

  • GP ‘flu/flu-like-illness’ (‘flu/FLI’) surveillance representing ~95% of the population - General Practice Intelligence Platform (GPIP).

  • Sentinel GP practices representing ~18% of the population.

  • Virological reports of influenza and RSV from the Regional Virus Laboratory (RVL) and all local laboratories - The Northern Ireland Health Analytics platform (NIHAP).

  • Laboratory confirmed flu outbreak notifications reported to PHA Health Protection duty room.

  • Hospital admissions and occupancy from the Patient Administration System (PAS) combined with infection episodes data from virological reports of influenza and RSV in NIHAP.

  • Mortality data from Northern Ireland Statistics and Research Agency (NISRA) of selected respiratory infections (some of which may be attributable to influenza).

  • Excess mortality estimations are calculated using the EuroMOMO (Mortality Monitoring in Europe) model based on raw death data supplied by NISRA.

5.2 Presentation of data

Unless otherwise stated, data are presented using epidemiological weeks (a standardised method of counting weeks [Monday-Sunday] to allow for the comparison of data year after year). This is dependent on the data available. The data included in this report are the most up to date data available at the time of the report; however, this is subject to change as the data are subject to ongoing quality assurance.

5.3 Episodes of infection

This bulletin includes information on episodes of both influenza and RSV infections.

For influenza infection episodes, they are defined by a rolling 42-day (6-week) period from the date of the first positive test result (utilising any test method, including PCR and Point of Care Tests, or source of sample, including hospital, GP, other source). This episode begins with the earliest positive specimen date. Any subsequent positive specimen dates within 42 days for the same individual are considered part of the same episode. Positive specimens for the same individual occurring more than 42 days after the last one are counted as a separate episode.

As for RSV infection episodes, the same methodology is employed, but with a rolling 14-day (2-week) period between positive test results.

Rates per 100,000 population are calculated using the NISRA 2021 Mid-Year Population Estimates.

5.4 Virology (including positivity)

All virology data provided here are preliminary. Virology data for prior weeks, as included in this or future bulletins, are subject to updates based on laboratory returns received after the last report was produced. The current bulletin offers the most current information available. Cumulative reports of influenza types may fluctuate from week to week, as Flu A (not subtyped) specimens may be subsequently typed in later reports.

Positive influenza results (dual positive influenza A and influenza B) can arise when vaccine virus is detected in a specimen taken from a person (e.g. a child under 16 years) who recently received intranasal administration of live attenuated influenza virus vaccine (LAIV). Therefore, the number of positive influenza results should be interpreted cautiously.

In contrast to influenza episodes, sentinel and non-sentinel influenza virological data are managed separately. Instead of utilising an episode-based approach, the data is analysed on an epidemiological week basis. Within each epidemiological week, an individual is limited to one influenza test, whether positive or negative, with separate reports for sentinel and non-sentinel virological data. If an individual tests positive for influenza during a specific epidemiological week and subsequently tests positive again within the same week, the second positive test is not counted. Regardless of whether it occurs before or after a negative test within the same epidemiological week, a positive test always takes precedence and is recorded. Similarly, only the first test of multiple negative results is counted for each individual within any given epidemiological week. This helps prevent the double-counting of tests, particularly for individuals who may be hospitalised and routinely tested.

The same methodology is applied when analysing RSV data.

5.5 Influenza and respiratory syncytial virus (RSV) outbreaks

PHA conducts surveillance of outbreaks across multiple settings, including care homes (nursing homes and residential homes) in NI that are registered with the Regulation and Quality Improvement Agency. All care homes have a requirement to notify the PHA Health Protection duty room of suspected outbreaks of any infectious disease. A confirmed outbreak of influenza or RSV can be defined as where there are two or more confirmed cases with onset within a 14 day period, where transmission within the Care Home facility is considered the likely cause.

5.6 Admissions and occupancy

Community-acquired influenza and RSV emergency admissions to acute hospitals are estimated by combining data from PAS and virological reports in NIHAP. Admissions are counted where there was a positive test up to seven days before admission or up to one day after admission, and the method of admission was ‘Emergency’. The number of inpatients is counted at midnight. Admissions and occupancy refer to the first admission per infection episode. It is not currently possible to distinguish emergency from other community acquired admissions in the South Eastern Health and Social Care Trust (SEHSCT) hospital data used for this bulletin following the introduction of a new electronic healthcare record on 6th November 2023. In the preceding influenza season, 95.7% of all community acquired influenza admissions were emergency admission. For this bulletin, all community acquired influenza and RSV admissions for SEHSCT are included from 6th November 2023 onwards (emergency and other). Work is ongoing to adapt systems and validation is ongoing.

5.7 Medical certificate of cause of death for respiratory-associated deaths

PHA report weekly counts of selected respiratory infection death registrations in NI, as supplied by NISRA. Deaths occurring in NI are registered on the NI General Register Office’s Registration System (NIROS).Provisional data on deaths registered in each week (ending on a Friday) are compiled at the end of the following week. The data presented here is based on registrations of deaths, not occurrences. The majority of deaths are registered within five days in NI. The selected respiratory infections include deaths due to influenza, bronchitis, bronchiolitis, and pneumonia. These figures may be impacted by General Registration Office closures over public holidays.

5.8 Excess mortality surveillance

PHA reports the weekly number of excess deaths from any cause in NI using the Mortality Monitoring in Europe (EuroMOMO) model. EuroMOMO provides a coordinated, timely and standardised approach to monitoring and analysing mortality data across the UK and Europe. Based on mortality data supplied by NISRA, the EuroMOMO model produces the number of expected and observed deaths every week, corrected for reporting delay and standardised for the population by age group and region. Excess mortality is defined as a statistically significant increase in the number of deaths reported over the expected number for a given point in time. Results are provisional due to the time delay in deaths registration.

6 Supplementary Tables

6.1 Flu/FLI consultation rates per 100,000 population, by age group, over a six week period

Year and Week

0-4

5-14

15-64

65+

Total

2024 - 11

7.48

6.89

9.80

10.19

9.38

2024 - 12

3.74

5.36

6.83

6.79

6.48

2024 - 13

3.75

3.45

7.27

7.63

6.67

2024 - 14

3.76

1.91

5.05

5.37

4.64

2024 - 15

1.88

1.53

6.45

3.67

5.12

2024 - 16

0.94

1.53

4.59

3.94

3.91

6.2 Unique episodes of influenza and RSV by epidemiological week, over a six week period

Year and Week

Unique episodes

2024 - 11

Influenza A

126

2024 - 11

Influenza B

6

2024 - 11

RSV

3

2024 - 12

Influenza A

90

2024 - 12

Influenza B

12

2024 - 12

RSV

1

2024 - 13

Influenza A

54

2024 - 13

Influenza B

13

2024 - 13

RSV

2

2024 - 14

Influenza A

37

2024 - 14

Influenza B

12

2024 - 14

RSV

1

2024 - 15

Influenza A

18

2024 - 15

Influenza B

12

2024 - 15

RSV

1

2024 - 16

Influenza A

13

2024 - 16

Influenza B

12

2024 - 16

RSV

1

6.3 Weekly influenza episode rates per 100,000 population, by age group, over a six week period

Age Group

2024 - 11

2024 - 12

2024 - 13

2024 - 14

2024 - 15

2024 - 16

0-4

18.58

21.23

11.50

5.31

3.54

5.31

5-14

6.76

0.79

2.78

1.99

0.79

0.00

15-64

4.21

3.80

2.31

1.65

1.07

1.16

65+

13.06

9.11

5.77

5.47

3.34

1.52

6.4 Weekly RSV episode rates per 100,000 population, by age group, over a six week period

Age Group

2024 - 11

2024 - 12

2024 - 13

2024 - 14

2024 - 15

2024 - 16

0-4

0.88

0.88

1.77

0.88

0.88

0.88

5-14

0.00

0.00

0.00

0.00

0.00

0.00

15-64

0.00

0.00

0.00

0.00

0.00

0.00

65+

0.61

0.00

0.00

0.00

0.00

0.00

6.5 Total sentinel tests and positivity for influenza and RSV by epidemiological week, over a six week period

Year and Week

Total Tests

Total Positives

Positivity (%)

2024 - 11

Influenza

6

0

0

2024 - 11

RSV

6

0

0

2024 - 12

Influenza

7

0

0

2024 - 12

RSV

7

0

0

2024 - 13

Influenza

3

0

0

2024 - 13

RSV

3

0

0

2024 - 14

Influenza

0

0

0

2024 - 14

RSV

0

0

0

2024 - 15

Influenza

3

0

0

2024 - 15

RSV

3

0

0

2024 - 16

Influenza

4

1

25

2024 - 16

RSV

4

0

0

6.6 Total non-sentinel tests and positivity for influenza and RSV by epidemiological week, over a six week period

Year and Week

Total Tests

Total Positives

Positivity (%)

2024 - 11

Influenza

1,656

138

8.33

2024 - 11

RSV

814

3

0.37

2024 - 12

Influenza

1,532

108

7.05

2024 - 12

RSV

735

1

0.14

2024 - 13

Influenza

1,553

71

4.57

2024 - 13

RSV

796

2

0.25

2024 - 14

Influenza

1,384

54

3.90

2024 - 14

RSV

652

1

0.15

2024 - 15

Influenza

1,264

33

2.61

2024 - 15

RSV

763

1

0.13

2024 - 16

Influenza

1,176

27

2.30

2024 - 16

RSV

677

1

0.15

6.7 Total influenza and RSV outbreaks, by subtype and setting, from week 40, 2023

Nursing

Assisted living

Hospital

Residential

Supported Living

Flu A (H1)

1

0

0

0

0

Flu A (H3)

1

0

0

0

0

Flu A (not subtyped)

39

1

26

2

1

Flu A (not subtyped) / COVID-19

5

0

0

0

0

Flu A (not subtyped) / RSV / COVID-19

1

0

0

0

0

RSV

2

0

0

0

0

RSV / COVID-19

1

0

0

0

0

More than one virus can be co-circulating at the same time in the same setting.